STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GATD1Glutamine amidotransferase like class 1 domain containing 1. (220 aa)    
Predicted Functional Partners:
PPP1R21
Protein phosphatase 1 regulatory subunit 21.
    
   0.919
TNNI2
Troponin I2, fast skeletal type.
   
 0.894
TNNI1
Troponin I1, slow skeletal type.
   
 0.894
TNNI3
Troponin I3, cardiac type.
   
 0.894
ENSCWAP00000027258
annotation not available
   
 0.894
TPM1
Tropomyosin 1.
   
 0.837
TPM3
Tropomyosin 3.
   
 0.837
TPM2
Tropomyosin 2.
   
 0.837
ENSCWAP00000010372
annotation not available
   
 0.837
TPM4
Tropomyosin 4.
   
 0.837
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.