STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRSF11Serine and arginine rich splicing factor 11. (483 aa)    
Predicted Functional Partners:
SRSF7
Serine and arginine rich splicing factor 7.
   
 0.988
SRSF9
Serine and arginine rich splicing factor 9.
   
 0.987
SRSF5
Serine and arginine rich splicing factor 5.
   
 0.983
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.982
ENSCWAP00000010327
annotation not available
   
 0.981
SLU7
SLU7 homolog, splicing factor.
     
 0.961
PABPN1
poly(A) binding protein nuclear 1.
   
 0.957
U2AF2
U2 small nuclear RNA auxiliary factor 2.
   
 0.956
SRRM1
Serine and arginine repetitive matrix 1.
   
 0.953
CDC40
Cell division cycle 40.
     
 0.944
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.