STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR83OSWD repeat domain 83 opposite strand. (106 aa)    
Predicted Functional Partners:
CCDC47
Coiled-coil domain containing 47.
    
 0.996
TMEM147
Transmembrane protein 147.
   
   0.971
TMCO1
Transmembrane and coiled-coil domains 1.
   
   0.948
RAB5IF
RAB5 interacting factor.
   
   0.938
RPL23
Ribosomal protein L23.
   
   0.935
RPL8
Ribosomal protein L8.
   
   0.934
SEC61B
SEC61 translocon beta subunit.
   
   0.934
RPL19
Ribosomal protein L19.
    
   0.932
NCLN
Nicalin.
    
   0.932
ENSCWAP00000013110
annotation not available
    
   0.932
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.