STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000010296annotation not available (200 aa)    
Predicted Functional Partners:
TCEAL1
Transcription elongation factor A like 1.
  
 
 0.838
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.715
HMGA1
High mobility group AT-hook 1.
      
 0.686
PTPN11
Protein tyrosine phosphatase non-receptor type 11.
    
 0.652
MIB2
Mindbomb E3 ubiquitin protein ligase 2.
   
  0.647
ARID4A
AT-rich interaction domain 4A.
    
 0.642
ARID4B
AT-rich interaction domain 4B.
    
 0.642
RAB9B
RAB9B, member RAS oncogene family.
    
 
 0.638
ENSCWAP00000018186
annotation not available
   
 0.638
TGFB1
Transforming growth factor beta 1.
   
   0.626
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.