STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF316Zinc finger protein 316. (985 aa)    
Predicted Functional Partners:
PXDC1
PX domain containing 1.
      
 0.619
HDDC2
HD domain containing 2.
      
 0.597
ALDH8A1
Aldehyde dehydrogenase 8 family member A1.
    
 
 0.560
TULP2
TUB like protein 2.
    
 
 0.553
ENSCWAP00000010046
annotation not available
    
 
 0.553
DUSP8
Dual specificity phosphatase 8.
    
 
 0.553
METTL15
Methyltransferase like 15.
    
 
 0.548
CCDC102B
Coiled-coil domain containing 102B.
      
 0.527
PLD5
Phospholipase D family member 5.
      
 0.526
SUFU
SUFU negative regulator of hedgehog signaling.
   
  0.520
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.