STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C20orf96Chromosome 20 open reading frame 96. (361 aa)    
Predicted Functional Partners:
ITSN2
Intersectin 2.
    
 0.927
ITSN1
Intersectin 1.
    
 0.897
SHANK1
SH3 and multiple ankyrin repeat domains 1.
    
 0.812
SHANK3
SH3 and multiple ankyrin repeat domains 3.
    
 0.812
MET
MET proto-oncogene, receptor tyrosine kinase.
   
 0.754
SHLD2
Shieldin complex subunit 2.
      
 0.754
MST1R
Macrophage stimulating 1 receptor.
   
 0.754
TSC2
TSC complex subunit 2.
    
 0.741
ENSCWAP00000010697
annotation not available
   
 0.726
TRIO
Trio Rho guanine nucleotide exchange factor.
   
 0.726
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.