STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRFN4Leucine rich repeat and fibronectin type III domain containing 4. (636 aa)    
Predicted Functional Partners:
NTNG1
Netrin G1.
    
 0.870
ADGRL2
Adhesion G protein-coupled receptor L2.
    
   0.823
ADGRL1
Adhesion G protein-coupled receptor L1.
    
   0.823
ADGRL3
Adhesion G protein-coupled receptor L3.
    
   0.823
PTPRF
Protein tyrosine phosphatase receptor type F.
    
 0.800
NTNG2
Netrin G2.
    
 0.790
PTPRD
Protein tyrosine phosphatase receptor type D.
    
 0.786
SNX27
Sorting nexin 27.
    
 
 0.730
PTPRS
Protein tyrosine phosphatase receptor type S.
    
 0.727
DUSP27
Dual specificity phosphatase 27, atypical.
    
 
 0.718
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.