STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM15Tripartite motif containing 15. (462 aa)    
Predicted Functional Partners:
OR12D3
Olfactory receptor family 12 subfamily D member 3.
      
 0.741
TRIM47
Tripartite motif containing 47.
      
 0.710
PXN
Paxillin.
    
 
 0.668
TRIM23
Tripartite motif containing 23.
    
 
 0.666
FBXO9
F-box protein 9.
    
 
 0.658
TRIM54
Tripartite motif containing 54.
      
 0.632
TRIM42
Tripartite motif containing 42.
      
 0.610
INTS6
Integrator complex subunit 6.
      
 0.608
PIGK
Phosphatidylinositol glycan anchor biosynthesis class K.
      
 0.607
ST6GALNAC5
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5.
      
 0.605
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.