STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D20TBC1 domain family member 20. (403 aa)    
Predicted Functional Partners:
RAB1B
RAB1B, member RAS oncogene family.
    
 0.959
RAB1A
RAB1A, member RAS oncogene family.
    
 0.945
RAB43
RAB43, member RAS oncogene family.
    
 0.854
RAB33B
RAB33B, member RAS oncogene family.
    
 0.854
RAB33A
RAB33A, member RAS oncogene family.
    
 0.842
RAB19
RAB19, member RAS oncogene family.
    
 0.842
RAB3GAP1
RAB3 GTPase activating protein catalytic subunit 1.
      
 0.760
TBC1D7
TBC1 domain family member 7.
      
 0.755
DENND1B
DENN domain containing 1B.
      
 0.750
RABL6
RAB, member RAS oncogene family like 6.
    
 0.746
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.