STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000011342annotation not available (425 aa)    
Predicted Functional Partners:
ENSCWAP00000017105
annotation not available
      
 0.755
SYCP3
Synaptonemal complex protein 3.
      
 0.701
NOBOX
NOBOX oogenesis homeobox.
      
 0.674
ENSCWAP00000010814
annotation not available
      
 0.655
LHX8
LIM homeobox 8.
      
 0.647
FIGLA
Folliculogenesis specific bHLH transcription factor.
      
 0.644
SYCE3
Synaptonemal complex central element protein 3.
      
 0.644
STRA8
Stimulated by retinoic acid 8.
      
 0.618
SYCE1
Synaptonemal complex central element protein 1.
      
 0.597
ZBTB16
Zinc finger and BTB domain containing 16.
      
 0.579
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.