STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIBPFGF1 intracellular binding protein. (357 aa)    
Predicted Functional Partners:
CDK5
Cyclin dependent kinase 5.
   
 
 0.810
C2CD5
C2 calcium dependent domain containing 5.
    
 
 0.798
CABLES1
Cdk5 and Abl enzyme substrate 1.
    
   0.767
TMEM94
Transmembrane protein 94.
    
   0.758
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.715
MIB2
Mindbomb E3 ubiquitin protein ligase 2.
   
  0.647
ARID4A
AT-rich interaction domain 4A.
    
 0.642
ARID4B
AT-rich interaction domain 4B.
    
 0.642
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.609
COPS6
COP9 signalosome subunit 6.
   
  0.607
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.