STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTERF1Mitochondrial transcription termination factor 1. (404 aa)    
Predicted Functional Partners:
TEFM
Transcription elongation factor, mitochondrial.
   
  
 0.772
RPL23A
Ribosomal protein L23a.
    
   0.750
TNRC18
Trinucleotide repeat containing 18.
   
    0.744
NFYB
Nuclear transcription factor Y subunit beta.
   
    0.744
MTERF3
Mitochondrial transcription termination factor 3.
   
  
 0.695
MRPL36
Mitochondrial ribosomal protein L36.
    
 
 0.665
TFB2M
Transcription factor B2, mitochondrial.
   
  
 0.655
TMEM70
Transmembrane protein 70.
      
 0.646
MRPL20
Mitochondrial ribosomal protein L20.
    
 
 0.630
UQCR10
Ubiquinol-cytochrome c reductase, complex III subunit X.
     
 0.626
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.