STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF128Ring finger protein 128. (431 aa)    
Predicted Functional Partners:
OTUB1
OTU deubiquitinase, ubiquitin aldehyde binding 1.
    
 0.965
OTUB2
OTU deubiquitinase, ubiquitin aldehyde binding 2.
    
 0.758
USP8
Ubiquitin specific peptidase 8.
    
 0.733
ENSCWAP00000019616
annotation not available
    
 0.661
ASB11
Ankyrin repeat and SOCS box containing 11.
      
 0.637
TCEAL1
Transcription elongation factor A like 1.
      
 0.625
USP21
Ubiquitin specific peptidase 21.
    
 0.615
USP2
Ubiquitin specific peptidase 2.
    
 0.615
ASB9
Ankyrin repeat and SOCS box containing 9.
      
 0.590
RC3H1
Ring finger and CCCH-type domains 1.
      
 0.531
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (20%) [ZH]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.