STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMIM26Small integral membrane protein 26. (94 aa)    
Predicted Functional Partners:
ANTKMT
Adenine nucleotide translocase lysine methyltransferase.
   
 
 0.658
OXLD1
Oxidoreductase like domain containing 1.
   
  
 0.637
YARS1
tyrosyl-tRNA synthetase 1.
     
 0.622
N6AMT1
N-6 adenine-specific DNA methyltransferase 1.
  
  
 0.621
TMEM242
Transmembrane protein 242.
      
 0.597
ACOT13
acyl-CoA thioesterase 13.
  
  
 0.577
ENSCWAP00000009226
annotation not available
      
 0.573
HDDC3
HD domain containing 3.
  
    0.563
LONRF3
LON peptidase N-terminal domain and ring finger 3.
      
 0.562
MIGA2
Mitoguardin 2.
      
 0.549
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.