STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPP1R16BProtein phosphatase 1 regulatory subunit 16B. (568 aa)    
Predicted Functional Partners:
PPP1CB
Protein phosphatase 1 catalytic subunit beta.
   
 0.833
ENSCWAP00000009797
annotation not available
   
 0.812
PPP1CC
Protein phosphatase 1 catalytic subunit gamma.
   
 0.812
ENSCWAP00000028687
annotation not available
   
 0.812
DHX35
DEAH-box helicase 35.
   
 
 0.722
TLCD3A
TLC domain containing 3A.
    
 
 0.687
NTHL1
Nth like DNA glycosylase 1.
      
 0.667
KATNAL2
Katanin catalytic subunit A1 like 2.
    
 0.655
RWDD1
RWD domain containing 1.
      
 0.642
PPP1R26
Protein phosphatase 1 regulatory subunit 26.
    
 
 0.632
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.