STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGTPBP1ATP/GTP binding protein 1. (1279 aa)    
Predicted Functional Partners:
HSPBAP1
HSPB1 associated protein 1.
      
 0.675
RASGEF1B
RasGEF domain family member 1B.
    
 
 0.635
ARHGAP24
Rho GTPase activating protein 24.
      
 0.625
CRTAC1
Cartilage acidic protein 1.
      
 0.576
ERAL1
Era like 12S mitochondrial rRNA chaperone 1.
   
 
 0.567
MRPS27
Mitochondrial ribosomal protein S27.
     
 0.561
TTLL4
Tubulin tyrosine ligase like 4.
    
 
 0.526
HAUS1
HAUS augmin like complex subunit 1.
    
  0.525
CERKL
Ceramide kinase like.
      
 0.521
CBX4
Chromobox 4.
      
 0.517
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.