STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DHX34DExH-box helicase 34. (1144 aa)    
Predicted Functional Partners:
WDR36
WD repeat domain 36.
   
 0.973
CDC40
Cell division cycle 40.
   
 0.970
CDC5L
Cell division cycle 5 like.
   
 0.970
DHX15
DEAH-box helicase 15.
  
0.970
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
   
 0.967
XAB2
XPA binding protein 2.
   
 0.967
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
   
 0.966
IMP3
IMP U3 small nucleolar ribonucleoprotein 3.
   
  0.966
BYSL
Bystin like.
   
 0.965
PRPF19
pre-mRNA processing factor 19.
   
 0.964
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.