STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC2A13Solute carrier family 2 member 13. (648 aa)    
Predicted Functional Partners:
KBTBD12
Kelch repeat and BTB domain containing 12.
    
 
 0.752
NAALADL2
N-acetylated alpha-linked acidic dipeptidase like 2.
     
 0.719
RTCB
RNA 2',3'-cyclic phosphate and 5'-OH ligase.
    
 0.701
SLC25A23
Solute carrier family 25 member 23.
    
 
 0.698
DHDH
Dihydrodiol dehydrogenase.
   
 
 0.685
DDX1
DEAD-box helicase 1.
    
 0.683
TMEM117
Transmembrane protein 117.
      
 0.681
RTRAF
RNA transcription, translation and transport factor.
    
 0.677
MRPS7
Mitochondrial ribosomal protein S7.
    
  0.676
RBM8A
RNA binding motif protein 8A.
    
 0.675
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.