STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1QTNF12C1q and TNF related 12. (300 aa)    
Predicted Functional Partners:
ENSCWAP00000007138
annotation not available
   
 
 0.966
UBE2G2
Ubiquitin conjugating enzyme E2 G2.
    
 0.871
ATG7
Autophagy related 7.
    
 0.825
ENSCWAP00000024421
annotation not available
    
 0.821
MARCHF6
Membrane associated ring-CH-type finger 6.
    
 
 0.789
UBA3
Ubiquitin like modifier activating enzyme 3.
   
 0.783
UBA5
Ubiquitin like modifier activating enzyme 5.
    
 0.775
UBE2G1
Ubiquitin conjugating enzyme E2 G1.
    
 0.769
ENSCWAP00000026246
annotation not available
    
 0.767
UBE2H
Ubiquitin conjugating enzyme E2 H.
     
 0.764
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.