STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USHBP1USH1 protein network component harmonin binding protein 1. (696 aa)    
Predicted Functional Partners:
MMRN2
Multimerin 2.
   
  
 0.920
FNDC1
Fibronectin type III domain containing 1.
    
 0.797
NEO1
Neogenin 1.
    
 0.797
DCC
DCC netrin 1 receptor.
    
 0.797
IGDCC4
Immunoglobulin superfamily DCC subclass member 4.
    
 0.797
IGDCC3
Immunoglobulin superfamily DCC subclass member 3.
    
 0.797
ZBTB25
Zinc finger and BTB domain containing 25.
      
 0.755
ZMAT4
Zinc finger matrin-type 4.
      
 0.704
KPNA6
Karyopherin subunit alpha 6.
      
 0.681
OIT3
Oncoprotein induced transcript 3.
      
 0.651
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.