STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CX3CR1C-X3-C motif chemokine receptor 1. (356 aa)    
Predicted Functional Partners:
CX3CL1
C-X3-C motif chemokine ligand 1.
     
 0.999
CCL2
C-C motif chemokine ligand 2.
   
 0.981
CCL5
C-C motif chemokine ligand 5.
   
 0.972
CXCL12
C-X-C motif chemokine ligand 12.
   
 0.972
CCL11
C-C motif chemokine ligand 11.
   
 0.964
CCL21
C-C motif chemokine ligand 21.
    
 0.961
CCL20
C-C motif chemokine ligand 20.
     
 0.960
CXCL16
C-X-C motif chemokine ligand 16.
     
 0.959
CCL8
C-C motif chemokine ligand 8.
   
 0.959
CXCL9
C-X-C motif chemokine ligand 9.
   
 0.956
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.