STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSR4Signal sequence receptor subunit 4. (173 aa)    
Predicted Functional Partners:
SSR2
Signal sequence receptor subunit 2.
   
 0.999
SSR3
Signal sequence receptor subunit 3.
   
 0.999
SSR1
Signal sequence receptor subunit 1.
   
 0.997
SEC61B
SEC61 translocon beta subunit.
   
 0.991
DDOST
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit.
   
 0.963
RPN2
Ribophorin II.
   
 0.930
ENSCWAP00000006276
annotation not available
   
 0.895
SEC61G
SEC61 translocon gamma subunit.
   
 0.895
DAD1
Defender against cell death 1.
   
 
 0.879
OSTC
Oligosaccharyltransferase complex non-catalytic subunit.
   
 
 0.862
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.