STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF287Zinc finger protein 287. (756 aa)    
Predicted Functional Partners:
UTP3
UTP3 small subunit processome component.
      
 0.643
PUS3
Pseudouridine synthase 3.
      
 0.639
GTF2H1
General transcription factor IIH subunit 1.
    
 
 0.615
TRIM28
Tripartite motif containing 28.
    
 0.608
CETN3
Centrin 3.
    
 
 0.605
MTO1
Mitochondrial tRNA translation optimization 1.
      
 0.554
SUFU
SUFU negative regulator of hedgehog signaling.
   
  0.521
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 
 0.512
ENSCWAP00000009050
annotation not available
    
  0.491
ENSCWAP00000009118
annotation not available
    
  0.491
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.