STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H1-0H1.0 linker histone. (194 aa)    
Predicted Functional Partners:
H1-4
H1.4 linker histone, cluster member.
     
0.950
KPNB1
Karyopherin subunit beta 1.
    
   0.932
DFFB
DNA fragmentation factor subunit beta.
    
 0.925
CDK2
Cyclin dependent kinase 2.
    
 
 0.904
H1-2
H1.2 linker histone, cluster member.
     
0.903
CDK3
Cyclin dependent kinase 3.
    
 
 0.800
CDK1
Cyclin dependent kinase 1.
    
 
 0.742
ENSCWAP00000011250
annotation not available
   
 
 0.726
H2BC5
H2B clustered histone 5.
   
 
 0.726
ENSCWAP00000012332
annotation not available
   
 
 0.726
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.