STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YIPF5Yip1 domain family member 5. (257 aa)    
Predicted Functional Partners:
DERL1
Derlin 1.
   
 0.919
YIF1B
Yip1 interacting factor homolog B, membrane trafficking protein.
    
 
 0.915
SYVN1
Synoviolin 1.
    
 0.864
YIPF2
Yip1 domain family member 2.
    
 
 0.860
TMEM167A
Transmembrane protein 167A.
   
    0.844
YIPF1
Yip1 domain family member 1.
    
 
 0.833
RNF139
Ring finger protein 139.
    
 0.794
YIF1A
Yip1 interacting factor homolog A, membrane trafficking protein.
    
 
 0.787
APOB
Apolipoprotein B.
    
  0.781
SEL1L
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
   
 
 0.777
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.