STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC30Leucine rich repeat containing 30. (299 aa)    
Predicted Functional Partners:
ATP1B4
ATPase Na+/K+ transporting family member beta 4.
   
  
 0.885
CDNF
Cerebral dopamine neurotrophic factor.
   
    0.846
CHRNA1
Cholinergic receptor nicotinic alpha 1 subunit.
   
    0.837
ADGRL2
Adhesion G protein-coupled receptor L2.
    
   0.823
ADGRL1
Adhesion G protein-coupled receptor L1.
    
   0.823
ADGRL3
Adhesion G protein-coupled receptor L3.
    
   0.823
ESPNL
Espin like.
    
 
 0.794
SLC12A7
Solute carrier family 12 member 7.
      
 0.756
ELF4
E74 like ETS transcription factor 4.
      
 0.748
NTNG1
Netrin G1.
    
 0.727
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.