STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C17orf64Chromosome 17 open reading frame 64. (231 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.912
RUVBL1
RuvB like AAA ATPase 1.
    
 0.785
NYNRIN
NYN domain and retroviral integrase containing.
    
 0.775
ACTR5
Actin related protein 5.
    
 0.773
POLR2F
RNA polymerase II subunit F.
    
 0.770
RUVBL2
RuvB like AAA ATPase 2.
    
 0.769
SSRP1
Structure specific recognition protein 1.
    
 0.769
BAZ1A
Bromodomain adjacent to zinc finger domain 1A.
   
 0.769
POLR2C
RNA polymerase II subunit C.
   
 0.768
INO80C
INO80 complex subunit C.
    
 0.763
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.