STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOX3SRY-box transcription factor 3. (446 aa)    
Predicted Functional Partners:
ENSCWAP00000004720
annotation not available
    
 0.881
ENSCWAP00000007522
annotation not available
    
 0.881
ENSCWAP00000009129
annotation not available
    
 0.869
ENSCWAP00000025984
annotation not available
    
 0.857
CTNNB1
Catenin beta 1.
    
 0.803
SALL4
Spalt like transcription factor 4.
    
 0.787
SOX10
SRY-box transcription factor 10.
   
0.719
NR5A2
Nuclear receptor subfamily 5 group A member 2.
    
 0.714
NR5A1
Nuclear receptor subfamily 5 group A member 1.
    
 0.714
RUNX2
RUNX family transcription factor 2.
   
 0.671
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.