STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRXCone-rod homeobox. (299 aa)    
Predicted Functional Partners:
NR2E3
Nuclear receptor subfamily 2 group E member 3.
   
 
 0.962
RCVRN
Recoverin.
   
  
 0.913
RHO
Rhodopsin.
   
  
 0.899
SIX3
SIX homeobox 3.
    
 
 0.748
GNAT1
G protein subunit alpha transducin 1.
   
  
 0.740
NRL
Neural retina leucine zipper.
    
 
 0.734
AIPL1
Aryl hydrocarbon receptor interacting protein like 1.
   
  
 0.703
CEP290
Centrosomal protein 290.
    
 
 0.688
POU4F2
POU class 4 homeobox 2.
   
  
 0.680
RDH12
Retinol dehydrogenase 12.
      
 0.667
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.