STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POC1APOC1 centriolar protein A. (407 aa)    
Predicted Functional Partners:
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.909
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.909
CXXC1
CXXC finger protein 1.
    
 0.894
WDR82
WD repeat domain 82.
  
 
0.852
ENSCWAP00000005887
annotation not available
    
 0.846
SETD1B
SET domain containing 1B, histone lysine methyltransferase.
    
 0.846
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.827
KANSL2
KAT8 regulatory NSL complex subunit 2.
    
 0.817
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.815
KMT2C
Lysine methyltransferase 2C.
    
 0.803
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.