STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMRN2Multimerin 2. (949 aa)    
Predicted Functional Partners:
USHBP1
USH1 protein network component harmonin binding protein 1.
   
  
 0.920
ROBO4
Roundabout guidance receptor 4.
   
  
 0.824
COMMD6
COMM domain containing 6.
    
 0.712
TMEM237
Transmembrane protein 237.
    
 
 0.710
CD93
CD93 molecule.
   
 
 0.691
TSPAN4
Tetraspanin 4.
      
 0.676
CTIF
Cap binding complex dependent translation initiation factor.
      
 0.676
KATNAL2
Katanin catalytic subunit A1 like 2.
    
 0.655
ENSCWAP00000017436
annotation not available
      
 0.650
NHSL2
NHS like 2.
      
 0.649
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.