STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000017893annotation not available (235 aa)    
Predicted Functional Partners:
SMAD3
SMAD family member 3.
    
 0.861
ENSCWAP00000010919
annotation not available
    
 0.856
ENSCWAP00000027610
annotation not available
    
 0.856
TGIF1
TGFB induced factor homeobox 1.
  
  
 
0.817
PBX1
PBX homeobox 1.
    
 0.714
PBX4
PBX homeobox 4.
    
 0.714
PBX3
PBX homeobox 3.
    
 0.714
PBX2
PBX homeobox 2.
    
 0.714
HDAC3
Histone deacetylase 3.
    
 0.695
SMAD9
SMAD family member 9.
    
 0.692
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.