STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP34Ubiquitin specific peptidase 34. (3462 aa)    
Predicted Functional Partners:
TRIP12
Thyroid hormone receptor interactor 12.
   
 
 0.973
UBB
Ubiquitin B.
   
 0.957
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.950
ASH1L
ASH1 like histone lysine methyltransferase.
   
 
 0.940
ANKRD17
Ankyrin repeat domain 17.
   
 
 0.932
BIRC6
Baculoviral IAP repeat containing 6.
   
 0.917
SETD2
SET domain containing 2, histone lysine methyltransferase.
   
 
 0.900
SMG1
SMG1 nonsense mediated mRNA decay associated PI3K related kinase.
   
   0.890
USP9X
Ubiquitin specific peptidase 9 X-linked.
   
 
0.883
ENSCWAP00000006692
annotation not available
    
 0.881
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.