STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSME3IP1Proteasome activator subunit 3 interacting protein 1. (254 aa)    
Predicted Functional Partners:
GSC
Goosecoid homeobox.
    
   0.963
PRPF8
pre-mRNA processing factor 8.
    
   0.894
CACTIN
Cactin, spliceosome C complex subunit.
    
 
 0.894
CDC5L
Cell division cycle 5 like.
    
   0.894
XAB2
XPA binding protein 2.
    
   0.894
ENSCWAP00000006567
annotation not available
    
 
 0.802
PSME3
Proteasome activator subunit 3.
    
 
 0.802
RBM8A
RNA binding motif protein 8A.
   
   0.748
BCAS2
BCAS2 pre-mRNA processing factor.
   
   0.745
EIF4A3
Eukaryotic translation initiation factor 4A3.
   
   0.745
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.