STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM183ATransmembrane protein 183A. (376 aa)    
Predicted Functional Partners:
TUBGCP2
Tubulin gamma complex associated protein 2.
    
 0.939
TUBG2
Tubulin gamma 2.
    
 0.927
TUBGCP3
Tubulin gamma complex associated protein 3.
    
 0.924
MZT1
Mitotic spindle organizing protein 1.
     
 0.896
TUBGCP6
Tubulin gamma complex associated protein 6.
  
 
 0.863
STON2
Stonin 2.
    
 0.712
VAMP3
Vesicle associated membrane protein 3.
    
 0.702
ITSN2
Intersectin 2.
     
 0.700
TMEM47
Transmembrane protein 47.
   
  
 0.667
HSF2BP
Heat shock transcription factor 2 binding protein.
      
 0.663
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.