STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5orf46Chromosome 5 open reading frame 46. (84 aa)    
Predicted Functional Partners:
LYPD4
LY6/PLAUR domain containing 4.
  
     0.513
SPINK5
Serine peptidase inhibitor, Kazal type 5.
  
    0.484
CNFN
Cornifelin.
   
    0.435
SSMEM1
Serine rich single-pass membrane protein 1.
  
     0.435
ENSCWAP00000017431
annotation not available
  
     0.415
LYPD5
LY6/PLAUR domain containing 5.
  
    0.414
CCDC196
Coiled-coil domain containing 196.
  
     0.406
KRTDAP
Keratinocyte differentiation associated protein.
   
    0.405
PVRIG
PVR related immunoglobulin domain containing.
  
     0.405
KPRP
Keratinocyte proline rich protein.
   
    0.400
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.