STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERP44Endoplasmic reticulum protein 44. (406 aa)    
Predicted Functional Partners:
PRDX4
Peroxiredoxin 4.
  
 0.979
ENSCWAP00000025453
annotation not available
   
 0.897
ERO1A
Endoplasmic reticulum oxidoreductase 1 alpha.
    
 0.895
SUOX
Sulfite oxidase.
    
 0.880
CANX
Calnexin.
   
 0.878
CALR
Calreticulin.
   
 0.870
ENSCWAP00000006118
annotation not available
   
 0.828
PRDX1
Peroxiredoxin 1.
  
 0.821
PRDX3
Peroxiredoxin 3.
  
 0.820
ERO1B
Endoplasmic reticulum oxidoreductase 1 beta.
    
 0.813
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.