STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH6Cadherin 6. (790 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta 1.
    
 0.930
JUP
Junction plakoglobin.
    
 0.918
CDH18
Cadherin 18.
  
0.896
CDH22
Cadherin 22.
   
 
 
0.894
CDH15
Cadherin 15.
     
0.893
CDH20
Cadherin 20.
  
  
0.892
CDH7
Cadherin 7.
  
  
0.892
CTNNA1
Catenin alpha 1.
    
 0.886
CDH3
Cadherin 3.
  
  
0.886
CDH11
Cadherin 11.
  
  
0.885
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.