STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R3HCC1R3H domain and coiled-coil containing 1. (472 aa)    
Predicted Functional Partners:
SVOPL
SVOP like.
      
 0.754
MOCS1
Molybdenum cofactor synthesis 1.
      
 0.674
ENSCWAP00000026386
annotation not available
      
 0.671
PGM2
Phosphoglucomutase 2.
      
 0.659
DMAP1
DNA methyltransferase 1 associated protein 1.
   
  
 0.637
USP4
Ubiquitin specific peptidase 4.
      
 0.628
JMJD1C
Jumonji domain containing 1C.
      
 0.599
FAM149A
Family with sequence similarity 149 member A.
      
 0.596
ENSCWAP00000016013
annotation not available
      
 0.575
TMEM247
Transmembrane protein 247.
      
 0.575
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.