STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNGR4Synaptogyrin 4. (235 aa)    
Predicted Functional Partners:
SYP
Synaptophysin.
    
 
 0.770
TEX26
Testis expressed 26.
      
 0.758
PLEKHB1
Pleckstrin homology domain containing B1.
      
 0.757
MXD3
MAX dimerization protein 3.
      
 0.689
RAB3A
RAB3A, member RAS oncogene family.
   
  
 0.682
DENND4A
DENN domain containing 4A.
      
 0.658
SPACA4
Sperm acrosome associated 4.
      
 0.647
ENSCWAP00000025523
annotation not available
      
 0.644
SYT1
Synaptotagmin 1.
   
  
 0.608
THEM6
Thioesterase superfamily member 6.
      
 0.597
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.