STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHIT1Chitinase 1. (466 aa)    
Predicted Functional Partners:
ZP2
Zona pellucida glycoprotein 2.
   
  0.943
ENSCWAP00000018186
annotation not available
   
 
 0.928
ZP4
Zona pellucida glycoprotein 4.
   
 0.892
HEXB
Hexosaminidase subunit beta.
    
 0.879
ENSCWAP00000006149
annotation not available
    
 0.879
COX5B
Cytochrome c oxidase subunit 5B.
   
 0.875
CHIA
Chitinase acidic.
  
  
 
0.867
COX6B1
Cytochrome c oxidase subunit 6B1.
   
 0.826
TRIR
Telomerase RNA component interacting RNase.
   
 0.826
COX6B2
Cytochrome c oxidase subunit 6B2.
   
 0.826
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.