STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZKSCAN1Zinc finger with KRAB and SCAN domains 1. (563 aa)    
Predicted Functional Partners:
TRIM28
Tripartite motif containing 28.
    
 0.606
CRBN
Cereblon.
    
 
 0.531
CLNS1A
Chloride nucleotide-sensitive channel 1A.
      
 0.529
ESYT2
Extended synaptotagmin 2.
      
 0.528
SUFU
SUFU negative regulator of hedgehog signaling.
   
  0.521
NUP54
Nucleoporin 54.
   
 0.521
NELFE
Negative elongation factor complex member E.
    
 
 0.515
ENSCWAP00000021753
annotation not available
      
 0.508
CAMSAP1
Calmodulin regulated spectrin associated protein 1.
      
 0.507
TMEM154
Transmembrane protein 154.
      
 0.507
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.