STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUBB1Tubulin beta 1 class VI. (449 aa)    
Predicted Functional Partners:
TUBA8
Tubulin alpha 8.
  
0.959
TUBAL3
Tubulin alpha like 3.
  
0.959
ENSCWAP00000020596
annotation not available
  
0.954
ENSCWAP00000006830
annotation not available
  
0.953
ENSCWAP00000024968
annotation not available
  
0.951
ENSCWAP00000024550
annotation not available
 
0.950
MAPT
Microtubule associated protein tau.
    
 0.928
DYNC1I1
Dynein cytoplasmic 1 intermediate chain 1.
    
 0.902
DYNC1I2
Dynein cytoplasmic 1 intermediate chain 2.
    
 0.902
ENSCWAP00000003877
annotation not available
  
0.901
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.