STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERGEFSecretion regulating guanine nucleotide exchange factor. (453 aa)    
Predicted Functional Partners:
ENSCWAP00000001002
annotation not available
    
 
 0.950
DPH3
Diphthamide biosynthesis 3.
    
 
 0.950
ENSCWAP00000012718
annotation not available
    
 
 0.941
HEATR9
HEAT repeat containing 9.
      
 0.790
ASIC2
Acid sensing ion channel subunit 2.
      
 0.712
RANBP2
RAN binding protein 2.
    
 0.698
CRTAM
Cytotoxic and regulatory T cell molecule.
      
 0.690
RAN
RAN, member RAS oncogene family.
    
 0.684
ADGRD1
Adhesion G protein-coupled receptor D1.
    
 0.684
ADGRB3
Adhesion G protein-coupled receptor B3.
    
 0.684
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.