SAFB protein (Catagonus wagneri) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

SAFB

Scaffold attachment factor B. (919 aa)

Predicted Functional Partners:

SRSF4

0.842

ACIN1

0.786

RBMX

0.755

ZNF358

0.747

SRSF9

0.720

ENSCWAP00000010327

0.714

TRA2A

0.700

TRA2B

0.686

PIAS3

0.678

ENSCWAP00000009401

0.673

Your Current Organism:

Catagonus wagneri

NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACIN1	SAFB	ENSCWAP00000026990	ENSCWAP00000020499	Apoptotic chromatin condensation inducer 1.	Scaffold attachment factor B.	0.786
ACIN1	TRA2B	ENSCWAP00000026990	ENSCWAP00000024393	Apoptotic chromatin condensation inducer 1.	Transformer 2 beta homolog.	0.557
ENSCWAP00000009401	SAFB	ENSCWAP00000009401	ENSCWAP00000020499	annotation not available	Scaffold attachment factor B.	0.673
ENSCWAP00000010327	RBMX	ENSCWAP00000010327	ENSCWAP00000009164	annotation not available	RNA binding motif protein X-linked.	0.838
ENSCWAP00000010327	SAFB	ENSCWAP00000010327	ENSCWAP00000020499	annotation not available	Scaffold attachment factor B.	0.714
ENSCWAP00000010327	SRSF4	ENSCWAP00000010327	ENSCWAP00000020895	annotation not available	Serine and arginine rich splicing factor 4.	0.930
ENSCWAP00000010327	SRSF9	ENSCWAP00000010327	ENSCWAP00000018070	annotation not available	Serine and arginine rich splicing factor 9.	0.989
ENSCWAP00000010327	TRA2A	ENSCWAP00000010327	ENSCWAP00000001448	annotation not available	Transformer 2 alpha homolog.	0.985
ENSCWAP00000010327	TRA2B	ENSCWAP00000010327	ENSCWAP00000024393	annotation not available	Transformer 2 beta homolog.	0.995
PIAS3	SAFB	ENSCWAP00000015707	ENSCWAP00000020499	Protein inhibitor of activated STAT 3.	Scaffold attachment factor B.	0.678
RBMX	ENSCWAP00000010327	ENSCWAP00000009164	ENSCWAP00000010327	RNA binding motif protein X-linked.	annotation not available	0.838
RBMX	SAFB	ENSCWAP00000009164	ENSCWAP00000020499	RNA binding motif protein X-linked.	Scaffold attachment factor B.	0.755
RBMX	SRSF4	ENSCWAP00000009164	ENSCWAP00000020895	RNA binding motif protein X-linked.	Serine and arginine rich splicing factor 4.	0.692
RBMX	SRSF9	ENSCWAP00000009164	ENSCWAP00000018070	RNA binding motif protein X-linked.	Serine and arginine rich splicing factor 9.	0.774
RBMX	TRA2A	ENSCWAP00000009164	ENSCWAP00000001448	RNA binding motif protein X-linked.	Transformer 2 alpha homolog.	0.755
RBMX	TRA2B	ENSCWAP00000009164	ENSCWAP00000024393	RNA binding motif protein X-linked.	Transformer 2 beta homolog.	0.850
SAFB	ACIN1	ENSCWAP00000020499	ENSCWAP00000026990	Scaffold attachment factor B.	Apoptotic chromatin condensation inducer 1.	0.786
SAFB	ENSCWAP00000009401	ENSCWAP00000020499	ENSCWAP00000009401	Scaffold attachment factor B.	annotation not available	0.673
SAFB	ENSCWAP00000010327	ENSCWAP00000020499	ENSCWAP00000010327	Scaffold attachment factor B.	annotation not available	0.714
SAFB	PIAS3	ENSCWAP00000020499	ENSCWAP00000015707	Scaffold attachment factor B.	Protein inhibitor of activated STAT 3.	0.678