STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LETMD1LETM1 domain containing 1. (360 aa)    
Predicted Functional Partners:
EIF2D
Eukaryotic translation initiation factor 2D.
   
    0.734
PJA2
Praja ring finger ubiquitin ligase 2.
    
 
 0.539
TEX35
Testis expressed 35.
      
 0.527
CSDC2
Cold shock domain containing C2.
      
 0.516
MBOAT2
Membrane bound O-acyltransferase domain containing 2.
      
 0.509
RBM23
RNA binding motif protein 23.
      
 0.495
FAM160B1
Family with sequence similarity 160 member B1.
      
 0.479
FOCAD
Focadhesin.
      
 0.459
SMARCC2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2.
   
  
 0.444
SNX4
Sorting nexin 4.
      
 0.444
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.