STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBFOX3RNA binding fox-1 homolog 3. (359 aa)    
Predicted Functional Partners:
PTBP2
Polypyrimidine tract binding protein 2.
    
 0.831
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.786
TEP1
Telomerase associated protein 1.
    
 0.763
PTBP1
Polypyrimidine tract binding protein 1.
    
 0.746
SRSF2
Serine and arginine rich splicing factor 2.
  
 
0.721
NCBP1
Nuclear cap binding protein subunit 1.
    
 0.720
ENSCWAP00000011123
annotation not available
   
  0.711
ENSCWAP00000018117
annotation not available
   
  0.711
SF3B1
Splicing factor 3b subunit 1.
    
 0.692
ENSCWAP00000000920
annotation not available
   
 0.689
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.