STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM83EFamily with sequence similarity 83 member E. (480 aa)    
Predicted Functional Partners:
TTBK2
Tau tubulin kinase 2.
    
 
 0.803
KIF22
Kinesin family member 22.
      
 0.759
DYNLL1
Dynein light chain LC8-type 1.
      
 0.719
HMMR
Hyaluronan mediated motility receptor.
      
 0.685
ENSCWAP00000007030
annotation not available
      
 0.680
VRK3
VRK serine/threonine kinase 3.
    
 
 0.671
ZSCAN20
Zinc finger and SCAN domain containing 20.
      
 0.605
TTLL11
Tubulin tyrosine ligase like 11.
      
 0.604
ZNF362
Zinc finger protein 362.
      
 0.597
MAPK8IP1
Mitogen-activated protein kinase 8 interacting protein 1.
      
 0.585
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.