STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF318Zinc finger protein 318. (2263 aa)    
Predicted Functional Partners:
NCBP1
Nuclear cap binding protein subunit 1.
    
 0.868
CSTF3
Cleavage stimulation factor subunit 3.
   
 0.868
SRSF2
Serine and arginine rich splicing factor 2.
   
 0.861
SNRPD2
Small nuclear ribonucleoprotein D2 polypeptide.
   
 0.854
ENSCWAP00000010435
annotation not available
   
 0.852
FIP1L1
Factor interacting with PAPOLA and CPSF1.
    
 0.850
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
   
 0.850
NCBP2L
Nuclear cap binding protein subunit 2 like.
    
 0.843
NCBP2
Nuclear cap binding protein subunit 2.
    
 0.843
SRPK1
SRSF protein kinase 1.
    
 0.839
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.