STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAFD1TRAF-type zinc finger domain containing 1. (610 aa)    
Predicted Functional Partners:
TRAF7
TNF receptor associated factor 7.
   
 0.759
MIB2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.704
TRAF6
TNF receptor associated factor 6.
   
 0.695
TRAF1
TNF receptor associated factor 1.
   
 0.693
BIRC6
Baculoviral IAP repeat containing 6.
   
 0.687
PELI2
Pellino E3 ubiquitin protein ligase family member 2.
    
 0.686
PELI3
Pellino E3 ubiquitin protein ligase family member 3.
    
 0.686
PELI1
Pellino E3 ubiquitin protein ligase 1.
    
 0.686
ENSCWAP00000020224
annotation not available
    
 0.680
TRAF5
TNF receptor associated factor 5.
   
 0.674
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.